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Official Description

MTHFR (5,10-methylenetetrahydrofolate reductase) (eg, hereditary hypercoagulability) gene analysis, common variants (eg, 677T, 1298C)

© Copyright 2025 American Medical Association. All rights reserved.

Common Language Description

The CPT® Code 81291 pertains to the molecular genetic testing of the MTHFR gene, specifically focusing on common variants such as 677T and 1298C. This testing is crucial for identifying mutations in the MTHFR gene, which encodes the enzyme methylenetetrahydrofolate reductase. This enzyme plays a vital role in the metabolism of amino acids, particularly in a biochemical pathway that converts 5,10-methylenetetrahydrofolate into 5-methyltetrahydrofolate. This conversion is essential for the transformation of the amino acid homocysteine into methionine, another amino acid necessary for various bodily functions. When mutations occur in the MTHFR gene, the enzyme's functionality is compromised, leading to an accumulation of homocysteine in the bloodstream. This condition is associated with hereditary hypercoagulability, a disorder characterized by an increased tendency to form blood clots. The inheritance pattern of this disorder is autosomal recessive, meaning that individuals must inherit the mutated gene from both parents to manifest the condition. Those who inherit the mutation from only one parent are considered carriers and typically do not exhibit symptoms. The MTHFR gene is located on chromosome 1, and the two most frequently identified mutations, 677T and 1298C, are linked to elevated levels of homocysteine and related hypercoagulability disorders. Elevated homocysteine levels can irritate blood vessels, contributing to atherosclerosis and increasing the risk of venous blood clotting. Treatment strategies for individuals with this disorder often include dietary supplementation with folate (folic acid) and vitamins B6 and B12. Molecular genetic testing is particularly indicated for individuals presenting with symptoms of hereditary hypercoagulability or those with a family history of the disorder, facilitating early diagnosis and management.

© Copyright 2025 Coding Ahead. All rights reserved.

1. Indications

The molecular genetic testing for the MTHFR gene analysis (CPT® Code 81291) is indicated for individuals who exhibit symptoms associated with hereditary hypercoagulability or have a family history of the disorder. The following conditions and symptoms may warrant this testing:

  • Hereditary Hypercoagulability Individuals presenting with a predisposition to abnormal blood clotting, which may lead to conditions such as deep vein thrombosis or pulmonary embolism.
  • Elevated Homocysteine Levels Patients with documented high levels of homocysteine in the blood, which can be a risk factor for cardiovascular diseases.
  • Family History Individuals with a family history of thrombotic events or hereditary hypercoagulability disorders, suggesting a genetic predisposition.
  • Recurrent Pregnancy Loss Women experiencing multiple miscarriages may be evaluated for underlying genetic factors, including MTHFR mutations.

2. Procedure

The procedure for MTHFR gene analysis involves several key steps to ensure accurate identification of the gene mutations. The following outlines the procedural steps:

  • Sample Collection A blood sample is collected from the patient, typically through venipuncture. This sample serves as the source of DNA for the genetic analysis.
  • DNA Extraction The collected blood sample undergoes a process of DNA extraction, where the genetic material is isolated from the blood cells. This step is crucial for obtaining pure DNA that can be analyzed for mutations.
  • Polymerase Chain Reaction (PCR) The extracted DNA is subjected to polymerase chain reaction (PCR) amplification, a technique that allows for the selective replication of specific DNA segments associated with the MTHFR gene. This amplification is necessary to generate sufficient quantities of DNA for analysis.
  • Mutation Analysis Following amplification, the specific regions of the MTHFR gene are analyzed for the presence of common variants, particularly 677T and 1298C. This analysis may involve sequencing or other molecular techniques to detect mutations.
  • Result Interpretation The results of the genetic analysis are interpreted by a qualified healthcare professional, who will assess the presence of mutations and their potential implications for the patient’s health.

3. Post-Procedure

After the MTHFR gene analysis is completed, patients may receive counseling regarding the results and their implications. If mutations are identified, healthcare providers may recommend lifestyle modifications, including dietary changes and supplementation with folate, vitamins B6, and B12, to manage elevated homocysteine levels. Additionally, patients may be monitored for any symptoms of hereditary hypercoagulability and may require further testing or interventions based on their individual risk factors. Follow-up appointments may be scheduled to discuss the results in detail and to develop a comprehensive management plan tailored to the patient's needs.

Short Descr MTHFR GENE
Medium Descr MTHFR GENE ANALYSIS COMMON VARIANTS
Long Descr MTHFR (5,10-methylenetetrahydrofolate reductase) (eg, hereditary hypercoagulability) gene analysis, common variants (eg, 677T, 1298C)
Status Code Statutory Exclusion (from MPFS, may be paid under other methodologies)
Global Days XXX - Global Concept Does Not Apply
PC/TC Indicator (26, TC) 9 - Not Applicable
Multiple Procedures (51) 9 - Concept does not apply.
Bilateral Surgery (50) 9 - Concept does not apply.
Physician Supervisions 09 - Concept does not apply.
Assistant Surgeon (80, 82) 9 - Concept does not apply.
Co-Surgeons (62) 9 - Concept does not apply.
Team Surgery (66) 9 - Concept does not apply.
Diagnostic Imaging Family 99 - Concept Does Not Apply
CLIA Waived (QW) No
APC Status Indicator Service Paid under Fee Schedule or Payment System other than OPPS
Type of Service (TOS) 5 - Diagnostic Laboratory
Berenson-Eggers TOS (BETOS) T1H - Lab tests - other (non-Medicare fee schedule)
MUE 1
CCS Clinical Classification 234 - Pathology
GZ Item or service expected to be denied as not reasonable and necessary
90 Reference (outside) laboratory: when laboratory procedures are performed by a party other than the treating or reporting physician or other qualified health care professional, the procedure may be identified by adding modifier 90 to the usual procedure number.
59 Distinct procedural service: under certain circumstances, it may be necessary to indicate that a procedure or service was distinct or independent from other non-e/m services performed on the same day. modifier 59 is used to identify procedures/services, other than e/m services, that are not normally reported together, but are appropriate under the circumstances. documentation must support a different session, different procedure or surgery, different site or organ system, separate incision/excision, separate lesion, or separate injury (or area of injury in extensive injuries) not ordinarily encountered or performed on the same day by the same individual. however, when another already established modifier is appropriate it should be used rather than modifier 59. only if no more descriptive modifier is available, and the use of modifier 59 best explains the circumstances, should modifier 59 be used. note: modifier 59 should not be appended to an e/m service. to report a separate and distinct e/m service with a non-e/m service performed on the same date, see modifier 25.
GA Waiver of liability statement issued as required by payer policy, individual case
XU Unusual non-overlapping service, the use of a service that is distinct because it does not overlap usual components of the main service
91 Repeat clinical diagnostic laboratory test: in the course of treatment of the patient, it may be necessary to repeat the same laboratory test on the same day to obtain subsequent (multiple) test results. under these circumstances, the laboratory test performed can be identified by its usual procedure number and the addition of modifier 91. note: this modifier may not be used when tests are rerun to confirm initial results; due to testing problems with specimens or equipment; or for any other reason when a normal, one-time, reportable result is all that is required. this modifier may not be used when other code(s) describe a series of test results (eg, glucose tolerance tests, evocative/suppression testing). this modifier may only be used for laboratory test(s) performed more than once on the same day on the same patient.
CC Procedure code change (use 'cc' when the procedure code submitted was changed either for administrative reasons or because an incorrect code was filed)
GW Service not related to the hospice patient's terminal condition
GY Item or service statutorily excluded, does not meet the definition of any medicare benefit or, for non-medicare insurers, is not a contract benefit
XS Separate structure, a service that is distinct because it was performed on a separate organ/structure
Date
Action
Notes
2012-01-01 Added Added
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Description
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