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Official Description

Electron microscopy, diagnostic

© Copyright 2025 American Medical Association. All rights reserved.

Common Language Description

Electron microscopy, diagnostic (CPT® Code 88348) is a specialized laboratory procedure that utilizes high magnification electron microscopy to examine thin sections of tissue at an ultrastructural level. This advanced imaging technique allows for a detailed analysis of cellular structures that are not visible through standard light microscopy. The process begins with the fixation of tissue using chemical agents, followed by dehydration and embedding in epoxy resin to preserve the tissue's integrity. Once the tissue is prepared, a block is trimmed, and the area of interest is selected using light microscopy. Ultrathin sections of the targeted tissue are then collected on copper mesh grids and stained to enhance electron density, making the tissue visible under the electron microscope. This method is particularly valuable in refining and improving diagnoses across various medical conditions. It plays a crucial role in the differential diagnosis of specific renal diseases, such as lupus nephritis and diabetic nephropathy, as well as in identifying various neoplasms and infectious diseases. Additionally, electron microscopy can assist in diagnosing metabolic disorders and conditions with obscure or unknown etiologies, thereby providing critical insights that guide clinical decision-making.

© Copyright 2025 Coding Ahead. All rights reserved.

1. Indications

Electron microscopy, diagnostic (CPT® Code 88348) is indicated for a variety of conditions and diseases where detailed ultrastructural analysis is necessary for accurate diagnosis. The following are specific indications for performing this procedure:

  • Renal Diseases Electron microscopy is utilized to assist in the differential diagnosis of various renal conditions, including lupus nephritis, proteinaceous deposits, immune complexes, subendothelial granular deposits in Kappa light chain disease, amyloid fibrils, intrinsic and acquired glomerular basement membrane abnormalities, hereditary nephritis, thin basement membrane nephropathy, diabetic nephropathy, and dense deposits associated with membranoproliferative glomerulonephritis type II.
  • Neoplasms This procedure aids in refining the diagnosis of numerous neoplasms, including poorly differentiated carcinomas, round cell neoplasms, spindle cell neoplasms, hematopoietic lymphoreticular malignancies, and differentiating between endocrine and non-endocrine tumors, as well as adenocarcinoma versus diffuse malignant mesothelioma and myelodysplastic syndromes.
  • Infectious Diseases Electron microscopy can be instrumental in diagnosing various infectious diseases, providing insights that may not be obtainable through other diagnostic methods.
  • Metabolic Disorders The procedure is also indicated for the evaluation of metabolic disorders, where ultrastructural changes can provide critical diagnostic information.
  • Obscure or Unknown Etiologies Electron microscopy is beneficial in cases where the disease etiology is obscure or unknown, including conditions such as mycosis fungoides, amyloidosis, mitochondrial myopathies, peripheral neuropathies, alcoholic liver disease, and skin hypersensitivity diseases.

2. Procedure

The procedure for diagnostic electron microscopy (CPT® Code 88348) involves several meticulous steps to ensure accurate and reliable results. The following outlines the procedural steps:

  • Tissue Fixation The first step involves fixing the tissue using chemical agents to preserve cellular structures. This is crucial for maintaining the integrity of the tissue during subsequent processing.
  • Dehydration and Embedding After fixation, the tissue undergoes dehydration to remove water content, followed by embedding in epoxy resin. This embedding medium is essential for creating a solid block that can be sliced into ultrathin sections.
  • Trimming the Block Once the tissue is embedded, the block is carefully trimmed to expose the area of interest. This step is performed using a microtome to ensure precision in the selection of the tissue to be analyzed.
  • Selection of Targeted Tissue The targeted tissue is selected using light microscopy, allowing the technician to identify the specific regions that require further examination under the electron microscope.
  • Collection of Ultrathin Sections Ultrathin sections of the selected tissue are then collected on copper mesh grids. These sections are typically less than 100 nanometers thick, which is necessary for electron microscopy.
  • Staining The collected sections are stained to enhance electron density, making the tissue structures visible under the electron microscope. This staining process is critical for highlighting specific cellular components and abnormalities.

3. Post-Procedure

After the diagnostic electron microscopy procedure is completed, there are several considerations for post-procedure care and expected outcomes. The stained ultrathin sections are examined under an electron microscope by a qualified pathologist or technician, who will analyze the ultrastructural details to provide a comprehensive report. The findings from the electron microscopy can significantly aid in confirming or refining diagnoses, guiding further clinical management. There are typically no specific recovery requirements for the patient, as this procedure is performed on tissue samples rather than on the patient directly. However, it is essential for healthcare providers to communicate the results to the referring physician promptly, as these findings may influence treatment decisions or further diagnostic testing.

Short Descr ELECTRON MICROSCOPY DX
Medium Descr ELECTRON MICROSCOPY DIAGNOSTIC
Long Descr Electron microscopy, diagnostic
Status Code Active Code
Global Days XXX - Global Concept Does Not Apply
PC/TC Indicator (26, TC) 1 - Diagnostic Tests for Radiology Services
Multiple Procedures (51) 0 - No payment adjustment rules for multiple procedures apply.
Bilateral Surgery (50) 0 - 150% payment adjustment for bilateral procedures does NOT apply.
Physician Supervisions 09 - Concept does not apply.
Assistant Surgeon (80, 82) 0 - Payment restriction for assistants at surgery applies to this procedure...
Co-Surgeons (62) 0 - Co-surgeons not permitted for this procedure.
Team Surgery (66) 0 - Team surgeons not permitted for this procedure.
Diagnostic Imaging Family 99 - Concept Does Not Apply
APC Status Indicator T-Packaged Codes
Type of Service (TOS) 5 - Diagnostic Laboratory
Berenson-Eggers TOS (BETOS) T1G - Lab tests - other (Medicare fee schedule)
MUE 1
CCS Clinical Classification 234 - Pathology

This is a primary code that can be used with these additional add-on codes.

0856T Add On Code Resequenced Code MPFS Status: Carrier Priced APC N Digitization of glass microscope slides for electron microscopy, diagnostic (List separately in addition to code for primary procedure)
26 Professional component: certain procedures are a combination of a physician or other qualified health care professional component and a technical component. when the physician or other qualified health care professional component is reported separately, the service may be identified by adding modifier 26 to the usual procedure number.
GC This service has been performed in part by a resident under the direction of a teaching physician
TC Technical component; under certain circumstances, a charge may be made for the technical component alone; under those circumstances the technical component charge is identified by adding modifier 'tc' to the usual procedure number; technical component charges are institutional charges and not billed separately by physicians; however, portable x-ray suppliers only bill for technical component and should utilize modifier tc; the charge data from portable x-ray suppliers will then be used to build customary and prevailing profiles
59 Distinct procedural service: under certain circumstances, it may be necessary to indicate that a procedure or service was distinct or independent from other non-e/m services performed on the same day. modifier 59 is used to identify procedures/services, other than e/m services, that are not normally reported together, but are appropriate under the circumstances. documentation must support a different session, different procedure or surgery, different site or organ system, separate incision/excision, separate lesion, or separate injury (or area of injury in extensive injuries) not ordinarily encountered or performed on the same day by the same individual. however, when another already established modifier is appropriate it should be used rather than modifier 59. only if no more descriptive modifier is available, and the use of modifier 59 best explains the circumstances, should modifier 59 be used. note: modifier 59 should not be appended to an e/m service. to report a separate and distinct e/m service with a non-e/m service performed on the same date, see modifier 25.
AQ Physician providing a service in an unlisted health professional shortage area (hpsa)
76 Repeat procedure or service by same physician or other qualified health care professional: it may be necessary to indicate that a procedure or service was repeated by the same physician or other qualified health care professional subsequent to the original procedure or service. this circumstance may be reported by adding modifier 76 to the repeated procedure or service. note: this modifier should not be appended to an e/m service.
X5 Diagnostic services requested by another clinician: for reporting services by a clinician who furnishes care to the patient only as requested by another clinician or subsequent and related services requested by another clinician; this modifier is reported for patient relationships that may not be adequately captured by the above alternative categories; reporting clinician service examples include but are not limited to, the radiologist's interpretation of an imaging study requested by another clinician
CR Catastrophe/disaster related
52 Reduced services: under certain circumstances a service or procedure is partially reduced or eliminated at the discretion of the physician or other qualified health care professional. under these circumstances the service provided can be identified by its usual procedure number and the addition of modifier 52, signifying that the service is reduced. this provides a means of reporting reduced services without disturbing the identification of the basic service. note: for hospital outpatient reporting of a previously scheduled procedure/service that is partially reduced or cancelled as a result of extenuating circumstances or those that threaten the well-being of the patient prior to or after administration of anesthesia, see modifiers 73 and 74 (see modifiers approved for asc hospital outpatient use).
77 Repeat procedure by another physician or other qualified health care professional: it may be necessary to indicate that a basic procedure or service was repeated by another physician or other qualified health care professional subsequent to the original procedure or service. this circumstance may be reported by adding modifier 77 to the repeated procedure or service. note: this modifier should not be appended to an e/m service.
90 Reference (outside) laboratory: when laboratory procedures are performed by a party other than the treating or reporting physician or other qualified health care professional, the procedure may be identified by adding modifier 90 to the usual procedure number.
91 Repeat clinical diagnostic laboratory test: in the course of treatment of the patient, it may be necessary to repeat the same laboratory test on the same day to obtain subsequent (multiple) test results. under these circumstances, the laboratory test performed can be identified by its usual procedure number and the addition of modifier 91. note: this modifier may not be used when tests are rerun to confirm initial results; due to testing problems with specimens or equipment; or for any other reason when a normal, one-time, reportable result is all that is required. this modifier may not be used when other code(s) describe a series of test results (eg, glucose tolerance tests, evocative/suppression testing). this modifier may only be used for laboratory test(s) performed more than once on the same day on the same patient.
GV Attending physician not employed or paid under arrangement by the patient's hospice provider
GW Service not related to the hospice patient's terminal condition
GY Item or service statutorily excluded, does not meet the definition of any medicare benefit or, for non-medicare insurers, is not a contract benefit
GZ Item or service expected to be denied as not reasonable and necessary
Q0 Investigational clinical service provided in a clinical research study that is in an approved clinical research study
Q1 Routine clinical service provided in a clinical research study that is in an approved clinical research study
Q6 Service furnished under a fee-for-time compensation arrangement by a substitute physician or by a substitute physical therapist furnishing outpatient physical therapy services in a health professional shortage area, a medically underserved area, or a rural area
XE Separate encounter, a service that is distinct because it occurred during a separate encounter
XP Separate practitioner, a service that is distinct because it was performed by a different practitioner
XS Separate structure, a service that is distinct because it was performed on a separate organ/structure
XU Unusual non-overlapping service, the use of a service that is distinct because it does not overlap usual components of the main service
Date
Action
Notes
2024-01-01 Changed Short Description changed. Guideline added.
2015-01-01 Changed Code description changed.
Pre-1990 Added Code added.
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